CDS

Accession Number TCMCG007C50467
gbkey CDS
Protein Id XP_033133802.1
Location join(20513748..20513821,20513913..20513965,20514064..20514188,20514267..20514365,20514446..20514583,20514672..20514725,20514816..20514934,20515026..20515164)
Gene LOC103836057
GeneID 103836057
Organism Brassica rapa

Protein

Length 266aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033277911.1
Definition E3 ubiquitin-protein ligase SP1 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description microtubule binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K03099        [VIEW IN KEGG]
ko:K15688        [VIEW IN KEGG]
ko:K16732        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko01521        [VIEW IN KEGG]
ko01522        [VIEW IN KEGG]
ko04010        [VIEW IN KEGG]
ko04012        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko04014        [VIEW IN KEGG]
ko04062        [VIEW IN KEGG]
ko04068        [VIEW IN KEGG]
ko04072        [VIEW IN KEGG]
ko04150        [VIEW IN KEGG]
ko04151        [VIEW IN KEGG]
ko04320        [VIEW IN KEGG]
ko04510        [VIEW IN KEGG]
ko04540        [VIEW IN KEGG]
ko04630        [VIEW IN KEGG]
ko04650        [VIEW IN KEGG]
ko04660        [VIEW IN KEGG]
ko04662        [VIEW IN KEGG]
ko04664        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04722        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko04910        [VIEW IN KEGG]
ko04912        [VIEW IN KEGG]
ko04915        [VIEW IN KEGG]
ko04917        [VIEW IN KEGG]
ko04926        [VIEW IN KEGG]
ko05034        [VIEW IN KEGG]
ko05160        [VIEW IN KEGG]
ko05165        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05205        [VIEW IN KEGG]
ko05206        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
ko05211        [VIEW IN KEGG]
ko05213        [VIEW IN KEGG]
ko05214        [VIEW IN KEGG]
ko05215        [VIEW IN KEGG]
ko05220        [VIEW IN KEGG]
ko05221        [VIEW IN KEGG]
ko05223        [VIEW IN KEGG]
ko05224        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
ko05226        [VIEW IN KEGG]
ko05231        [VIEW IN KEGG]
map01521        [VIEW IN KEGG]
map01522        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
map04012        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map04014        [VIEW IN KEGG]
map04062        [VIEW IN KEGG]
map04068        [VIEW IN KEGG]
map04072        [VIEW IN KEGG]
map04150        [VIEW IN KEGG]
map04151        [VIEW IN KEGG]
map04320        [VIEW IN KEGG]
map04510        [VIEW IN KEGG]
map04540        [VIEW IN KEGG]
map04630        [VIEW IN KEGG]
map04650        [VIEW IN KEGG]
map04660        [VIEW IN KEGG]
map04662        [VIEW IN KEGG]
map04664        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04722        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map04910        [VIEW IN KEGG]
map04912        [VIEW IN KEGG]
map04915        [VIEW IN KEGG]
map04917        [VIEW IN KEGG]
map04926        [VIEW IN KEGG]
map05034        [VIEW IN KEGG]
map05160        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05205        [VIEW IN KEGG]
map05206        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
map05211        [VIEW IN KEGG]
map05213        [VIEW IN KEGG]
map05214        [VIEW IN KEGG]
map05215        [VIEW IN KEGG]
map05220        [VIEW IN KEGG]
map05221        [VIEW IN KEGG]
map05223        [VIEW IN KEGG]
map05224        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
map05226        [VIEW IN KEGG]
map05231        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000022        [VIEW IN EMBL-EBI]
GO:0000070        [VIEW IN EMBL-EBI]
GO:0000073        [VIEW IN EMBL-EBI]
GO:0000075        [VIEW IN EMBL-EBI]
GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0000920        [VIEW IN EMBL-EBI]
GO:0000923        [VIEW IN EMBL-EBI]
GO:0001578        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005876        [VIEW IN EMBL-EBI]
GO:0005880        [VIEW IN EMBL-EBI]
GO:0005881        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006928        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007018        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007051        [VIEW IN EMBL-EBI]
GO:0007052        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007097        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008017        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010389        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0010970        [VIEW IN EMBL-EBI]
GO:0010972        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030473        [VIEW IN EMBL-EBI]
GO:0030705        [VIEW IN EMBL-EBI]
GO:0030863        [VIEW IN EMBL-EBI]
GO:0030981        [VIEW IN EMBL-EBI]
GO:0030989        [VIEW IN EMBL-EBI]
GO:0031023        [VIEW IN EMBL-EBI]
GO:0032118        [VIEW IN EMBL-EBI]
GO:0032153        [VIEW IN EMBL-EBI]
GO:0032155        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044448        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044878        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051225        [VIEW IN EMBL-EBI]
GO:0051231        [VIEW IN EMBL-EBI]
GO:0051233        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051255        [VIEW IN EMBL-EBI]
GO:0051256        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051300        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051647        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0055028        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072384        [VIEW IN EMBL-EBI]
GO:0072686        [VIEW IN EMBL-EBI]
GO:0090307        [VIEW IN EMBL-EBI]
GO:0097427        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099070        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099111        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0110100        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140014        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902749        [VIEW IN EMBL-EBI]
GO:1902750        [VIEW IN EMBL-EBI]
GO:1902850        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903562        [VIEW IN EMBL-EBI]
GO:1903563        [VIEW IN EMBL-EBI]
GO:1905047        [VIEW IN EMBL-EBI]
GO:1990023        [VIEW IN EMBL-EBI]
GO:1990498        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTCAGATTGCTATTTATTTGTCATGTGGTGCCACAGCATGTTGTTACCTCTGGGGCCGTAGAATCAAAGGGAAAGCTGACTCTTTTAACAGTATTACCCGTGTGGCCGACATCAAATGCTTAGATGATTTGCTTAAAGAGAAAGCCTCGAATCTCCTTGTTGTTTTGTCCGGAAAAGTTGCTTCTGCAACGCCCTTTAACTGCAAACATGATGATGATTCTTCTTCGGGTGATGTTTTTGAGGCTAAGTTCGAAATGGAGTATGAGACCAAAAAGGACGATGATGGTGGTTTGATACACAAGTCTCATAATTTTCTGCTTCAAATCAACGAGACTCCTTGGTATCTTGAAGACGGTACTGGTCTGGTGAAAGTAGTGAGAGCTGAACTTGCTGATGGATATGTTGATACTATGAAACCGCAATTTGATATGTTGTCAATGAGTGAAATCTTTCAGAGGTTTGAAAACCCCCAAGAAGGCTCTAAGGTGATCTGTCGTTGTGCTCTCGATACTGGTACCTCCTTGACTATTGTTGGCGAGGCTGCTAGAGACGAAGCTGGTACTCTCTCGATTCAAAATCCCAAGGAACAGTCTTTTATGATCTTCAGTGGAGAGGGCTCGTTTGATAAAATGGTTGCCAACTTGAAGTCAAATTCAGAGTTTTACTTTTTCTACTCCAAGATCTTTGGAACTATTGCAGTGGCTATAGCCGTCGTGAAAGGTGTGGGTTTCGTAAGAAGGGTTCTTCGTGAGAGATCAGAGAATGCTACTGATTCAGACAACGAAGAAAACCCATGA
Protein:  
MLQIAIYLSCGATACCYLWGRRIKGKADSFNSITRVADIKCLDDLLKEKASNLLVVLSGKVASATPFNCKHDDDSSSGDVFEAKFEMEYETKKDDDGGLIHKSHNFLLQINETPWYLEDGTGLVKVVRAELADGYVDTMKPQFDMLSMSEIFQRFENPQEGSKVICRCALDTGTSLTIVGEAARDEAGTLSIQNPKEQSFMIFSGEGSFDKMVANLKSNSEFYFFYSKIFGTIAVAIAVVKGVGFVRRVLRERSENATDSDNEENP